Widespread and tissue-specific expression of endogenous retroelements in human somatic tissues

Résumé

Endogenous retroelements (EREs) constitute about 42% of the human genome and have been implicated in common human diseases such as autoimmunity and cancer. The dominant paradigm holds that EREs are expressed in embryonic stem cells (ESCs) and germline cells but are repressed in differentiated somatic cells. Despite evidence that some EREs can be expressed at the RNA and protein levels in specific contexts, a system-level evaluation of their expression in human tissues is lacking.,

Publication
Genome Medicine
Assya Trofimov
Assya Trofimov
Étudiante au doctorat en informatique (2017-2022)

Le modèle Factorized Embeddings: vers un atlas cellulaire basé sur les données de séquençage

Sébastien Lemieux
Sébastien Lemieux
Chercheur principal

Chercheur principal, Unité de recherche en bio-informatique fonctionnelle et structurale, IRIC | Direction scientifique de la plateforme de Bio-informatique | Professeur agrégé, Département de biochimie et médecine moléculaire, Université de Montréal